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Simultaneous Estimation of Many Sparse Networks via Hierarchical Poisson Log-Normal Model
A hierarchical Poisson Log-Normal model to simultaneously estimate many gene expression networks from scRNA-seq data that effectively incorporates shared network structures.
Changhao Ge, Hongzhe Li
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Simultaneous Estimation of Many Sparse Networks via Hierarchical Poisson Log-Normal Model
RCANE: A Deep Learning Algorithm for Whole-genome Pan-Cancer Somatic Copy Number Aberration Prediction using RNA-seq Data
A deep learning-based method designed to predict genome-wide SCNAs across diverse cancer types using RNA-seq data from The Cancer Genome Atlas (TCGA) and DepMap cancer cell lines.
Changhao Ge, Xiaowen Hu, Lin Zhang, Hongzhe Li
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RCANE: A Deep Learning Algorithm for Whole-genome Pan-Cancer Somatic Copy Number Aberration Prediction using RNA-seq Data
A Variational Spike-and-Slab Approach for Group Variable Selection
A parameter-expanded Coordinate-Ascent Variational Inference algorithm for high-dimensional linear regression models with grouped variables under spike-and-slab priors.
Changhao Ge, Buyu Lin, Jun S. Liu
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A Variational Spike-and-Slab Approach for Group Variable Selection